Drug repurposing improves disease targeting 11-fold and can be augmented by network module targeting, applied to COVID-19.
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Rivero-García I, Castresana-Aguirre M, Guglielmo L, Guala D, Sonnhammer ELL
Sci Rep 11 (1) 20687 [2021-10-19; online 2021-10-19]
This analysis presents a systematic evaluation of the extent of therapeutic opportunities that can be obtained from drug repurposing by connecting drug targets with disease genes. When using FDA-approved indications as a reference level we found that drug repurposing can offer an average of an 11-fold increase in disease coverage, with the maximum number of diseases covered per drug being increased from 134 to 167 after extending the drug targets with their high confidence first neighbors. Additionally, by network analysis to connect drugs to disease modules we found that drugs on average target 4 disease modules, yet the similarity between disease modules targeted by the same drug is generally low and the maximum number of disease modules targeted per drug increases from 158 to 229 when drug targets are neighbor-extended. Moreover, our results highlight that drug repurposing is more dependent on target proteins being shared between diseases than on polypharmacological properties of drugs. We apply our drug repurposing and network module analysis to COVID-19 and show that Fostamatinib is the drug with the highest module coverage.
PubMed 34667255
DOI 10.1038/s41598-021-99721-y
Crossref 10.1038/s41598-021-99721-y
pii: 10.1038/s41598-021-99721-y
Code, raw data, analysis results, and figures are all available in bitbucket