Category: Proteins

JSON
CSV
XLSX
TXT

Primary: Shown in the list of current labels.

Year 2025

PubMed DOI Crossref
Functional T cell response to COVID-19 vaccination with or without natural infection with SARS-CoV-2 in adults and children.
Akhtar E, Kuddusi RU, Talukder MT, ..., Sarker P, Raqib R
Sci Rep 15 (1) 13341 [2025-04-17; online 2025-04-17]
Category: Proteins Category: Vaccines Type: Journal article
PubMed DOI Crossref
Distinct Omicron longitudinal memory T cell profile and T cell receptor repertoire associated with COVID-19 hospitalisation.
Markey G, McLaughlin J, McDaid D, ..., Shukla P, Gibson DS
Front Immunol 16 (-) 1549570 [2025-04-02; online 2025-04-02]
Category: Omicron VoC Category: Proteins Type: Journal article
PubMed DOI Crossref
Variant-Specific Interactions at the Plasma Membrane: Heparan Sulfate's Impact on SARS-CoV-2 Binding Kinetics.
Conca DV, Bano F, Graul M, ..., Dahlin A, Bally M
Anal Chem 97 (8) 4318-4328 [2025-03-04; online 2025-02-20]
Category: Omicron VoC Category: Proteins Funder: H2020 Funder: KAW/SciLifeLab National COVID program Funder: VR Type: Journal article
PubMed DOI Crossref
Increased cerebrospinal fluid ACE2 fragments as a read-out of brain infection in COVID-19 encephalopathy patients.
Lennol MP, García-Ayllón M, Avilés-Granados C, ..., Pilotto A, Sáez-Valero J
The Journal of Infectious Diseases - (-) - [2025-02-26; online 2025-02-26]
Category: Health Category: Proteins Funder: VR Type: Journal article
PubMed DOI Crossref
Structural prediction of chimeric immunogen candidates to elicit targeted antibodies against betacoronaviruses.
Simpson J, Kasson PM
PLoS Comput Biol 21 (2) e1012812 [2025-02-00; online 2025-02-05]
Category: Genomics & transcriptomics Category: Proteins Type: Journal article
PubMed DOI Crossref
Molecular mechanisms behind the anti corona virus activity of small metal oxide nanoparticles.
Greijer B, Nefedova A, Agback T, ..., Ivask A, Kessler VG
Nanoscale - (-) - [2025-01-23; online 2025-01-23]
Category: Biochemistry Category: Proteins Funder: VR Type: Journal article
PubMed DOI Crossref
High prevalence of undocumented SARS-CoV-2 infections revealed by analysis of nucleocapsid-specific IgG responses in diagnosed and undiagnosed individuals.
Blom K, Galanis I, Bacchus P, ..., Groenheit R, Klingström J
PLOS Glob Public Health 5 (1) e0003300 [2025-01-22; online 2025-01-22]
Category: Proteins Category: Serology Funder: VR Type: Journal article
PubMed DOI Crossref
Regulation of N-degron recognin-mediated autophagy by the SARS-CoV-2 PLpro ubiquitin deconjugase.
Ayala-Torres C, Liu J, Dantuma NP, Masucci MG
Autophagy - (-) 1-20 [2025-01-02; online 2025-01-02]
Category: Proteins Funder: KAW/SciLifeLab National COVID program
PubMed DOI Crossref
Oral Immunisation With Non-GMO Surface Displayed SARS-CoV-2 Spike Epitopes on Bacteria-Like Particles Provokes Robust Humoral and Cellular Immune Responses, and Modulated the Gut Microbiome in Mice.
Vasquez R, Song JH, Mendoza RM, ..., Valeriano VD, Kang D
Microb Biotechnol 18 (1) e70073 [2025-01-00; online 2025-01-11]
Category: Proteins Category: Vaccines Type: Journal article

Year 2024

PubMed DOI Crossref
Overlapping Systemic Proteins in COVID-19 and Lung Fibrosis Associated with Tissue Remodeling and Inflammation.
Svobodová B, Löfdahl A, Nybom A, ..., Westergren-Thorsson G, Elowsson L
Biomedicines 12 (12) - [2024-12-19; online 2024-12-19]
Category: Health Category: Post-COVID Category: Proteins Category: Serology Funder: Hjärt-Lungfonden Funder: VR Type: Journal article
PubMed DOI Crossref
Characterization of SARS-CoV-2 nucleocapsid protein oligomers.
Farci D, Graça AT, Hall M, ..., Schröder WP, Piano D
J Struct Biol 217 (1) 108162 [2024-12-13; online 2024-12-13]
Category: Genomics & transcriptomics Category: Imaging Category: Proteins Type: Journal article
PubMed DOI Crossref
SARS-CoV-2 N protein recruits G3BP to double membrane vesicles to promote translation of viral mRNAs.
Long S, Guzyk M, Perez Vidakovics L, ..., Achour A, McInerney GM
Nat Commun 15 (1) 10607 [2024-12-05; online 2024-12-05]
Category: Genomics & transcriptomics Category: Proteins Type: Journal article
PubMed DOI Crossref
Emerging mutation in SARS-CoV-2 facilitates escape from NK cell recognition and associates with enhanced viral fitness.
Bilev E, Wild N, Momayyezi P, ..., Achour A, Hammer Q
PLoS Pathog 20 (12) e1012755 [2024-12-00; online 2024-12-09]
Category: Proteins Funder: VR Type: Journal article
PubMed DOI Crossref
Maternal infection of SARS-CoV-2 during the first and second trimesters leads to newborn telomere shortening.
Wang L, Zhang J, Liu F, ..., Kong F, Xu D
J Transl Med 22 (1) 1049 [2024-11-21; online 2024-11-21]
Category: Health Category: Proteins Category: Serology Type: Journal article
PubMed DOI Crossref
SARS-CoV-2 and HSV-1 Induce Amyloid Aggregation in Human CSF Resulting in Drastic Soluble Protein Depletion.
Christ W, Kapell S, Sobkowiak MJ, ..., El Andaloussi S, Ezzat K
ACS Chem Neurosci 15 (22) 4095-4104 [2024-11-20; online 2024-11-07]
Category: Proteins Type: Journal article
PubMed DOI Crossref
Avidity maturation of anti-spike IgG after vaccination in COVID-19 convalescent vs COVID-19 naïve patients.
Löfström E, Eringfält A, Kötz A, Tham J, Undén J
APMIS - (-) - [2024-11-07; online 2024-11-07]
Category: Proteins Category: Serology Type: Journal article
PubMed DOI Crossref
Autoantibodies to protein S may explain rare cases of coagulopathy following COVID-19 vaccination.
Yalcinkaya A, Cavalli M, Aranda-Guillén M, ..., Hallberg P, Landegren N
Sci Rep 14 (1) 24512 [2024-10-18; online 2024-10-18]
Category: Proteins Category: Serology Funder: KAW/SciLifeLab National COVID program Funder: VR Type: Journal article
PubMed DOI Crossref
Systemic increase in IL-26 is associated with severe COVID-19 and comorbid obstructive lung disease.
Cardenas EI, Robertson J, Misaghian S, ..., Gisslén M, Lindén A
Front Immunol 15 (-) 1434186 [2024-10-04; online 2024-10-04]
Category: Proteins Funder: Hjärt-Lungfonden Funder: KAW/SciLifeLab National COVID program Funder: VR
PubMed DOI Crossref
The CoV-Y domain of SARS-CoV-2 Nsp3 interacts with BRAP to stimulate NF-κB signaling and induce host inflammatory responses.
Wang K, Ni X, Deng X, ..., Zeng R, Lei J
Int J Biol Macromol 280 (Pt 4) 136123 [2024-09-28; online 2024-09-28]
Category: Proteins Type: Journal article
PubMed DOI Crossref
Asymmetric imidazole-4,5-dicarboxamide derivatives as SARS-CoV-2 main protease inhibitors: design, synthesis and biological evaluation.
Huynh PNH, Khamplong P, Phan M, ..., Choowongkomon K, Vo CT
RSC Med Chem - (-) - [2024-09-03; online 2024-09-03]
Category: Proteins Type: Journal article
PubMed DOI Crossref
Isolation and characterization of IgG3 glycan-targeting antibodies with exceptional cross-reactivity for diverse viral families.
Vukovich MJ, Shiakolas AR, Lindenberger J, ..., Sautto GA, Georgiev IS
PLoS Pathog 20 (9) e1012499 [2024-09-00; online 2024-09-18]
Category: Genomics & transcriptomics Category: Proteins Funder: SciLifeLab PLP program Type: Journal article
PubMed DOI Crossref
The role of complement and extracellular vesicles in the development of pulmonary embolism in severe COVID-19 cases.
Dumitrescu G, Antovic J, Soutari N, ..., Rooyackers O, Taxiarchis A
PLoS One 19 (8) e0309112 [2024-08-23; online 2024-08-23]
Category: Proteins Category: Serology Funder: KAW/SciLifeLab National COVID program Type: Journal article
DOI Crossref
Defining short linear motif binding determinants by phage-based multiplexed deep mutational scanning
Benz C, Maasen L, Simonetti L, ..., Davey NE, Ivarsson Y
- - (-) - [2024-08-06; online 2024-08-06]
Category: Proteins Type: Preprint
PubMed DOI Crossref
Protective non-neutralizing SARS-CoV-2 monoclonal antibodies.
Izadi A, Nordenfelt P
Trends Immunol 45 (8) 609-624 [2024-08-00; online 2024-07-20]
Category: Proteins Funder: VR Type: Journal article
PubMed DOI Crossref
Increasing plasma calprotectin (S100A8/A9) is associated with 12-month mortality and unfavourable functional outcome in critically ill COVID-19 patients.
Didriksson I, Lengquist M, Spångfors M, ..., Friberg H, Schiopu A
J Intensive Care 12 (1) 26 [2024-07-09; online 2024-07-09]
Category: Proteins Funder: Hjärt-Lungfonden Funder: VR Type: Journal article
PubMed DOI Crossref
Mammalian cell display with automated oligo design and library assembly allows for rapid residue level conformational epitope mapping.
Thalén NB, Karlander M, Lundqvist M, ..., Ohlin M, Rockberg J
Commun Biol 7 (1) 805 [2024-07-03; online 2024-07-03]
Category: Imaging Category: Proteins Type: Journal article
PubMed DOI Crossref
ADAM-17 Activity and Its Relation to ACE2: Implications for Severe COVID-19.
Sun J, Edsfeldt A, Svensson J, ..., Goncalves I, Swärd P
Int J Mol Sci 25 (11) - [2024-05-29; online 2024-05-29]
Category: Genomics & transcriptomics Category: Proteins Funder: Hjärt-Lungfonden Funder: VR Type: Journal article
PubMed DOI Crossref
Yin and yang of interferons: lessons from the coronavirus disease 2019 (COVID-19) pandemic.
Svensson Akusjärvi S, Zanoni I
Curr Opin Immunol 87 (-) 102423 [2024-05-21; online 2024-05-21]
Category: Other Category: Proteins Funder: VR Type: Review
PubMed DOI Crossref
Structural basis of broad SARS-CoV-2 cross-neutralization by affinity-matured public antibodies.
Sheward DJ, Pushparaj P, Das H, ..., Karlsson Hedestam GB, Hällberg BM
Cell Rep Med - (-) 101577 [2024-05-15; online 2024-05-15]
Category: Genomics & transcriptomics Category: Omicron VoC Category: Proteins Funder: KAW/SciLifeLab National COVID program Funder: VR Type: Journal article
PubMed DOI Crossref
Anexelekto (AXL) no more: microRNA-155 (miR-155) controls the "Uncontrolled" in SARS-CoV-2.
Papadopoulos KI, Papadopoulou A, Aw TC
Hum Cell 37 (3) 582-592 [2024-05-00; online 2024-03-12]
Category: Genomics & transcriptomics Category: Proteins Type: Review
PubMed DOI Crossref
Proteome profiling of home-sampled dried blood spots reveals proteins of SARS-CoV-2 infections.
Fredolini C, Dodig-Crnković T, Bendes A, ..., Roxhed N, Schwenk JM
Commun Med (Lond) 4 (1) 55 [2024-04-02; online 2024-04-02]
Category: Proteins Type: Journal article
DOI Crossref
Synthetic coevolution reveals adaptive mutational trajectories of neutralizing antibodies and SARS-CoV-2
Ehling RA, Minot M, Overath MD, ..., Murrell B, Reddy ST
- - (-) - [2024-04-01; online 2024-04-01]
Category: Proteins Category: Serology Type: Preprint
PubMed DOI Crossref
Plasma neutrophil gelatinase-associated lipocalin independently predicts dialysis need and mortality in critical COVID-19.
Engström J, Koozi H, Didriksson I, ..., Frigyesi A, Spångfors M
Sci Rep 14 (1) 6695 [2024-03-20; online 2024-03-20]
Category: Health Category: Proteins Type: Journal article
PubMed DOI Crossref
New insights into complex formation by SARS-CoV-2 nsp10 and nsp14.
Sele C, Krupinska E, Andersson Rasmussen A, ..., Fisher SZ, Knecht W
Nucleosides Nucleotides Nucleic Acids - (-) 1-15 [2024-02-29; online 2024-02-29]
Category: Genomics & transcriptomics Category: Proteins Type: Journal article
PubMed DOI Crossref
Identifying novel inhibitors targeting Exportin-1 for the potential treatment of COVID-19.
Sharma T, Mondal T, Khan S, ..., Baig MH, Dong J
Arch Microbiol 206 (2) 69 [2024-01-19; online 2024-01-19]
Category: Drug Discovery Category: Genomics & transcriptomics Category: Proteins Funder: VR Type: Journal article
PubMed DOI Crossref
Targeting the Main Protease (Mpro, nsp5) by Growth of Fragment Scaffolds Exploiting Structure-Based Methodologies.
Altincekic N, Jores N, Löhr F, ..., Sreeramulu S, Schwalbe H
ACS Chem Biol - (-) - [2024-01-17; online 2024-01-17]
Category: Drug Discovery Category: Proteins Funder: H2020 Funder: KAW/SciLifeLab National COVID program Type: Journal article
PubMed DOI Crossref
Profiling of Surface Protein Epitopes on Viral Particles by Multiplex Dual-Reporter Strategy.
Sahi M, Andersson S, Mattson C, ..., Chiodi F, Fredolini C
J Vis Exp - (203) - [2024-01-12; online 2024-01-12]
Category: Proteins Funder: KAW/SciLifeLab National COVID program Type: Journal article
PubMed DOI Crossref
Immune system perturbations in patients with long COVID.
Rodriguez L, Brodin P
Trends Mol Med - (-) - [2024-01-04; online 2024-01-04]
Category: Post-COVID Category: Proteins Category: Serology Type: Journal article
PubMed DOI Crossref
Exploring the conformational dynamics of the SARS-CoV-2 SL4 hairpin by combining optical tweezers and base analogues.
Sundar Rajan V, Wypijewska Del Nogal A, Levin S, Wilhelmsson LM, Westerlund F
Nanoscale 16 (2) 752-764 [2024-01-03; online 2024-01-03]
Category: Biochemistry Category: Genomics & transcriptomics Category: Proteins Funder: VR Type: Journal article
PubMed DOI Crossref
The NSP3 protein of SARS-CoV-2 binds fragile X mental retardation proteins to disrupt UBAP2L interactions.
Garvanska DH, Alvarado RE, Mundt FO, ..., Menachery VD, Nilsson J
EMBO Rep - (-) - [2024-01-02; online 2024-01-02]
Category: Proteins Funder: VR Type: Journal article

Year 2023

PubMed DOI Crossref
Venomous gland transcriptome and venom proteomic analysis of the scorpion Androctonus amoreuxi reveal new peptides with anti-SARS-CoV-2 activity.
Ghazal A, Clarke D, Abdel-Rahman MA, ..., Hijazi K, Houssen WE
Peptides 173 (-) 171139 [2023-12-22; online 2023-12-22]
Category: Proteins Type: Journal article
PubMed DOI Crossref
Influenza-A mediated pre-existing immunity levels to SARS-CoV-2 could predict early COVID-19 outbreak dynamics.
Almazán NM, Rahbar A, Carlsson M, ..., Sörensen B, Söderberg-Nauclér C
iScience 26 (12) 108441 [2023-12-15; online 2023-11-14]
Category: Biochemistry Category: Health Category: Proteins Category: Serology Category: Vaccines Funder: H2020 Funder: KAW/SciLifeLab National COVID program Funder: VR Type: Journal article
PubMed DOI Crossref
Dramatic Differences between the Structural Susceptibility of the S1 Pre- and S2 Postfusion States of the SARS-CoV-2 Spike Protein to External Electric Fields Revealed by Molecular Dynamics Simulations.
Lipskij A, Arbeitman C, Rojas P, Ojeda-May P, Garcia ME
Viruses 15 (12) - [2023-12-11; online 2023-12-11]
Category: Biochemistry Category: Proteins Type: Journal article
PubMed DOI Crossref
Polymethoxyflavone from Citrus depressa as an inhibitor against various variants of SARS-CoV-2 spike protein.
Liu T, Hsu S, Hsieh YSY, Liu H, Lee C
J Ethnopharmacol 320 (-) 117412 [2023-11-21; online 2023-11-21]
Category: Biochemistry Category: Drug Discovery Category: Proteins Type: Journal article
PubMed DOI Crossref
Development of a proteomic signature associated with severe disease for patients with COVID-19 using data from 5 multicenter, randomized, controlled, and prospective studies.
Castro-Pearson S, Samorodnitsky S, Yang K, ..., Safo SE, Tignanelli CJ
Sci Rep 13 (1) 20315 [2023-11-20; online 2023-11-20]
Category: Proteins Type: Journal article
PubMed DOI Crossref
Design, structure and plasma binding of ancestral β-CoV scaffold antigens.
Hueting D, Schriever K, Sun R, ..., Andréll J, Syrén P
Nat Commun 14 (1) 6527 [2023-10-16; online 2023-10-16]
Category: Biochemistry Category: Proteins Funder: KAW/SciLifeLab National COVID program Funder: VR Type: Journal article
PubMed DOI Crossref
SARS-CoV-2 reservoir in post-acute sequelae of COVID-19 (PASC).
Proal AD, VanElzakker MB, Aleman S, ..., Yonker LM, Wherry EJ
Nat Immunol 24 (10) 1616-1627 [2023-10-00; online 2023-09-04]
Category: Biochemistry Category: Post-COVID Category: Proteins Type: Review
PubMed DOI Crossref
Evaluation of a human mucosal tissue explant model for SARS-CoV-2 replication.
Gordhan BG, Herrera C, Pillay A, ..., Fox J, Kana BD
PLoS One 18 (9) e0291146 [2023-09-28; online 2023-09-28]
Category: Genomics & transcriptomics Category: Health Category: Other Category: Proteins Type: Journal article
PubMed DOI Crossref
Prevalence of SARS-CoV-2 Omicron Sublineages and Spike Protein Mutations Conferring Resistance against Monoclonal Antibodies in a Swedish Cohort during 2022-2023.
Haars J, Palanisamy N, Wallin F, ..., Kaden R, Lennerstrand J
Microorganisms 11 (10) - [2023-09-27; online 2023-09-27]
Category: Biochemistry Category: Proteins Type: Journal article
PubMed DOI Crossref
De novo design of anti-variant COVID-19 vaccine.
Goswami A, Kumar M, Ullah S, Gore MM
Biol Methods Protoc 8 (1) bpad021 [2023-09-26; online 2023-09-26]
Category: Proteins Category: Vaccines Type: Journal article
PubMed DOI Crossref
Comprehensive proteomics and meta-analysis of COVID-19 host response.
Babačić H, Christ W, Araújo JE, ..., Klingström J, Pernemalm M
Nat Commun 14 (1) 5921 [2023-09-22; online 2023-09-22]
Category: Other Category: Proteins Funder: KAW/SciLifeLab National COVID program Funder: VR Type: Journal article
PubMed DOI Crossref
Identification of motif-based interactions between SARS-CoV-2 protein domains and human peptide ligands pinpoint antiviral targets.
Mihalič F, Benz C, Kassa E, ..., Jemth P, Ivarsson Y
Nat Commun 14 (1) 5636 [2023-09-13; online 2023-09-13]
Category: Biochemistry Category: Proteins Funder: KAW/SciLifeLab National COVID program Funder: VR Type: Journal article
PubMed DOI Crossref
Oligomeric State of β-Coronavirus Non-Structural Protein 10 Stimulators Studied by Small Angle X-ray Scattering.
Knecht W, Fisher SZ, Lou J, ..., Pinotsis N, Kozielski F
Int J Mol Sci 24 (17) - [2023-09-04; online 2023-09-04]
Category: Imaging Category: Proteins Type: Journal article
PubMed DOI Crossref
Pentameric C-reactive protein is a better prognostic biomarker and remains elevated for longer than monomeric CRP in hospitalized patients with COVID-19.
Hopkins FR, Nordgren J, Fernandez-Botran R, ..., Sjöwall J, Larsson M
Front Immunol 14 (-) 1259005 [2023-09-01; online 2023-09-01]
Category: Biochemistry Category: Health Category: Proteins Funder: KAW/SciLifeLab National COVID program Funder: VR Type: Journal article
PubMed DOI Crossref
High-Density Lipoprotein function is modulated by the SARS-CoV-2 spike protein in a lipid-type dependent manner.
Correa Y, Del Giudice R, Waldie S, ..., Roosen-Runge F, Cárdenas M
J Colloid Interface Sci 645 (-) 627-638 [2023-09-00; online 2023-04-29]
Category: Biochemistry Category: Proteins Funder: VR Type: Journal article
PubMed DOI Crossref
Entangling of Peptide Nanofibers Reduces the Invasiveness of SARS-CoV-2.
Yang P, Ye X, Liu M, ..., Wang H, Zhao Y
Adv Healthc Mater 12 (24) e2300673 [2023-09-00; online 2023-05-14]
Category: Proteins Type: Journal article
PubMed DOI Crossref
Super-resolution proximity labeling reveals anti-viral protein network and its structural changes against SARS-CoV-2 viral proteins.
Lee Y, Jung M, Kim J, ..., Mun JY, Rhee H
Cell Rep 42 (8) 112835 [2023-08-29; online 2023-07-20]
Category: Proteins Type: Journal article
PubMed DOI Crossref
Prognostic potential of creatinine and Cystatin C in COVID-19 - a retrospective cohort study from Karolinska University Hospital.
Sjöström A, Markgren PO, Hansson M
Scand J Clin Lab Invest 83 (4) 251-257 [2023-07-00; online 2023-05-11]
Category: Proteins Category: Serology Type: Journal article
PubMed DOI Crossref
Prognostic performance of blood neurofilament light chain protein in hospitalized COVID-19 patients without major central nervous system manifestations: an individual participant data meta-analysis.
Abdelhak A, Barba L, Romoli M, ..., Foschi M, Abu-Rumeileh S
J Neurol 270 (7) 3315-3328 [2023-07-00; online 2023-05-15]
Category: Health Category: Proteins Type: Journal article
PubMed DOI Crossref
Reduced Binding between Omicron B.1.1.529 and the Human ACE2 Receptor in a Surrogate Virus Neutralization Test for SARS-CoV-2.
Hoffman T, Kolstad L, Akaberi D, ..., Rönnberg B, Lundkvist Å
Viruses 15 (6) - [2023-05-30; online 2023-05-30]
Category: Proteins Category: Serology Funder: KAW/SciLifeLab National COVID program Funder: VR Type: Journal article
PubMed DOI Crossref
Nucleocapsid-specific T cell responses associate with control of SARS-CoV-2 in the upper airways before seroconversion.
Eser TM, Baranov O, Huth M, ..., Hoelscher M, Geldmacher C
Nat Commun 14 (1) 2952 [2023-05-24; online 2023-05-24]
Category: Biochemistry Category: Proteins Type: Journal article
DOI Crossref
Long COVID is primarily a Spike protein Induced Thrombotic Vasculitis
Kerr R, Carroll HA
- - (-) - [2023-05-18; online 2023-05-18]
Category: Post-COVID Category: Proteins Type: Preprint
PubMed DOI Crossref
A novel precision-serology assay for SARS-CoV-2 infection based on linear B-cell epitopes of Spike protein.
Lundin SB, Kann H, Fulurija A, ..., Gisslén M, Harandi AM
Front Immunol 14 (-) 1166924 [2023-05-12; online 2023-05-12]
Category: Proteins Category: Serology Funder: KAW/SciLifeLab National COVID program Funder: VR Funder: Vinnova Type: Journal article

Year 2022

PubMed DOI Crossref
Seroprevalence and T-cell response in 32 children 10 months after COVID-19.
Moritz D, Krifors A, Freyhult E, Månsson E
Acta Paediatr - (-) - [2022-02-12; online 2022-02-12]
Category: Health Category: Proteins Type: Journal article

Year 2021

PubMed DOI Crossref
The effects of a physical and cognitive training intervention vs. physical training alone on older adults' physical activity: A randomized controlled trial with extended follow-up during COVID-19.
Savikangas T, Törmäkangas T, Tirkkonen A, ..., Stigsdotter Neely A, Sipilä S
PLoS One 16 (10) e0258559 [2021-10-13; online 2021-10-13]
Category: Proteins Type: Journal article
PubMed DOI Crossref
Dynamic Interactions of Fully Glycosylated SARS-CoV-2 Spike Protein with Various Antibodies.
Cao Y, Choi YK, Frank M, ..., Seok C, Im W
J Chem Theory Comput 17 (10) 6559-6569 [2021-10-12; online 2021-09-16]
Category: Drug Discovery Category: Health Category: Proteins Type: Journal article
PubMed DOI Crossref
Association Between Risk of COVID-19 Infection in Nonimmune Individuals and COVID-19 Immunity in Their Family Members.
Nordström P, Ballin M, Nordström A
JAMA Intern Med - (-) - [2021-10-11; online 2021-10-11]
Category: Proteins Type: Journal article
PubMed DOI Crossref
Antiphospholipid antibodies and neurological manifestations in acute COVID-19: A single-centre cross-sectional study.
Benjamin LA, Paterson RW, Moll R, ..., Efthymiou M, UCLH Queen Square COVID-19 Biomarker Study group
EClinicalMedicine 39 (-) 101070 [2021-09-00; online 2021-08-12]
Category: Biochemistry Category: Health Category: Proteins Type: Journal article
PubMed DOI Crossref
X-linked recessive TLR7 deficiency in ~1% of men under 60 years old with life-threatening COVID-19.
Asano T, Boisson B, Onodi F, ..., Zhang Q, Casanova JL
Sci Immunol 6 (62) eabl4348 [2021-08-19; online 2021-08-21]
Category: Biochemistry Category: Health Category: Proteins Type: Journal article
PubMed DOI Crossref
Autoantibodies neutralizing type I IFNs are present in ~4% of uninfected individuals over 70 years old and account for ~20% of COVID-19 deaths.
Bastard P, Gervais A, Le Voyer T, ..., Abel L, Casanova JL
Sci Immunol 6 (62) eabl4340 [2021-08-19; online 2021-08-21]
Category: Biochemistry Category: Health Category: Proteins Type: Journal article
PubMed DOI Crossref
Preexisting autoantibodies to type I IFNs underlie critical COVID-19 pneumonia in patients with APS-1.
Bastard P, Orlova E, Sozaeva L, ..., Casanova JL, Lionakis MS
J Exp Med 218 (7) - [2021-07-05; online 2021-04-24]
Category: Biochemistry Category: Health Category: Proteins Type: Journal article
PubMed DOI Crossref
Rapid diagnostic testing for SARS-CoV-2: Validation and comparison of three point-of-care antibody tests.
Strand R, Thelaus L, Fernström N, ..., Linder A, Rasmussen M
J Med Virol 93 (7) 4592-4596 [2021-07-00; online 2021-05-03]
Category: Health Category: Other Category: Proteins Type: Journal article
PubMed DOI Crossref
SARS-CoV-2 antigen testing: weighing the false positives against the costs of failing to control transmission.
Fearon E, Buchan IE, Das R, ..., Stage HB, Wingfield T
Lancet Respir Med - (-) - [2021-06-14; online 2021-06-14]
Category: Biochemistry Category: Health Category: Proteins Type: Journal article
PubMed DOI Crossref
High-throughput immunoassays for SARS-CoV-2 - considerable differences in performance when comparing three methods.
Ekelund O, Ekblom K, Somajo S, ..., Olsson K, Petersson A
Infect Dis (Lond) - (-) 1-6 [2021-05-29; online 2021-05-29]
Category: Biochemistry Category: Proteins Type: Journal article
PubMed DOI Crossref
Structure, Dynamics, Receptor Binding, and Antibody Binding of the Fully Glycosylated Full-Length SARS-CoV-2 Spike Protein in a Viral Membrane.
Choi YK, Cao Y, Frank M, ..., Seok C, Im W
J Chem Theory Comput 17 (4) 2479-2487 [2021-04-13; online 2021-03-10]
Category: Biochemistry Category: Proteins Type: Journal article
PubMed DOI Crossref
Ultra-fast proteomics with Scanning SWATH.
Messner CB, Demichev V, Bloomfield N, ..., Tate S, Ralser M
Nat Biotechnol - (-) - [2021-03-25; online 2021-03-25]
Category: Biochemistry Category: Proteins Type: Journal article
PubMed DOI Crossref
Anti-SARS-CoV2 antibody responses in serum and cerebrospinal fluid of COVID-19 patients with neurological symptoms
Cunningham JL, Virhammar J, Rönnberg B, ..., Karlsson Hedestam GB, Rostami E
The Journal of Infectious Diseases - (-) - [2021-03-21; online 2021-03-21]
Category: Biochemistry Category: Health Category: Proteins Funder: H2020 Funder: KAW/SciLifeLab National COVID program Funder: VR Research Area: High-throughput and high-content serology Type: Journal article
DOI Crossref
COVID-19 Antibody Testing of Patients Admitted to the ICU by a Novel, Point-of-Care Assay, and the Relationship to Survival
Casswell S, Eriksson AK, Moberg L, ..., Marshall F, Venge P
Research Square - (-) - [2021-03-10; online 2021-03-10]
Category: Biochemistry Category: Proteins Funder: KAW/SciLifeLab National COVID program Research Area: Biobanks for COVID-19 research Type: Preprint
PubMed DOI Crossref
Antibodies to SARS-CoV-2 and risk of past or future sick leave.
Dillner J, Elfström KM, Blomqvist J, ..., Mühr LSA, Conneryd Lundgren K
Sci Rep 11 (1) 5160 [2021-03-04; online 2021-03-04]
Category: Health Category: Proteins Funder: KAW/SciLifeLab National COVID program Research Area: High-throughput and high-content serology Type: Journal article
DOI Crossref
Protection induced by a human monoclonal antibody recognizing two different epitopes in a conserved region of streptococcal M proteins
Bahnan W, Happonen L, Khakzad H, ..., Malmström J, Nordenfelt P
bioRxiv - (-) - [2021-03-02; online 2021-03-02]
Category: Biochemistry Category: Proteins Type: Preprint
PubMed DOI Crossref
Time series analysis and mechanistic modelling of heterogeneity and sero-reversion in antibody responses to mild SARS‑CoV-2 infection.
Manisty C, Treibel TA, Jensen M, ..., Noursadeghi M, Moon JC
EBioMedicine 65 (-) 103259 [2021-03-01; online 2021-03-01]
Category: Genomics & transcriptomics Category: Proteins Funder: H2020 Type: Journal article
PubMed DOI Crossref
Functional myeloid-derived suppressor cells expand in blood but not airways of COVID-19 patients and predict disease severity
Falck-Jones S, Vangeti S, Yu M, ..., Farnert A, Smed-Sorensen A
J Clin Invest 131 (6) - [2021-01-28; online 2021-01-25]
Category: Health Category: Proteins Funder: KAW/SciLifeLab National COVID program Funder: VR Research Area: High-throughput and high-content serology Type: Journal article
DOI Crossref
Bispecific antibody neutralizes circulating SARS-CoV-2 variants, prevents escape and protects mice from disease
De Gasparo R, Pedotti M, Simonelli L, ..., Ruzek D, Varani L
- - (-) - [2021-01-22; online 2021-01-22]
Category: Biochemistry Category: Proteins Type: Preprint
PubMed DOI Crossref
Psychological Impact of COVID-19 Cases on Medical Staff of Beijing Xiaotangshan Hospital.
Fu Y, Wang M, Zhao B, ..., Li B, Liu Q
Psychol Res Behav Manag 14 (-) 41-47 [2021-01-18; online 2021-01-18]
Category: Proteins Type: Journal article
PubMed DOI Crossref
Structure-guided multivalent nanobodies block SARS-CoV-2 infection and suppress mutational escape
Koenig PA, Das H, Liu H, ..., Wu NC, Schmidt FI
Science 371 (6530) eabe6230 [2021-01-12; online 2021-01-12]
Category: Biochemistry Category: Imaging Category: Proteins Funder: H2020 Funder: VR Type: Journal article

Year 2020

PubMed DOI Crossref
Picomolar SARS-CoV-2 Neutralization Using Multi-Arm PEG Nanobody Constructs.
Moliner-Morro A, J Sheward D, Karl V, ..., McInerney GM, Hanke L
Biomolecules 10 (12) - [2020-12-11; online 2020-12-11]
Category: Biochemistry Category: Proteins Funder: H2020 Funder: VR Funder: VR: Special COVID-19 funding Type: Journal article
DOI Crossref
Novel Broad-Spectrum Antiviral Inhibitors Targeting Host Factors Essential for Replication of Pathogenic RNA Viruses
Tampere M, Pettke A, Salata C, ..., Jafari R, Puumalainen MR
Viruses 12 (12) 1423 [2020-12-10; online 2020-12-10]
Category: Biochemistry Category: Drug Discovery Category: Genomics & transcriptomics Category: Proteins Funder: VR Type: Journal article
PubMed DOI Crossref
The Structural Basis of Accelerated Host Cell Entry by SARS-CoV-2 †.
Seyran M, Takayama K, Uversky VN, ..., Brufsky AM, Uhal BD
FEBS J - (-) - [2020-12-02; online 2020-12-02]
Category: Biochemistry Category: Proteins Type: Journal article
PubMed DOI Crossref
Selection, biophysical and structural analysis of synthetic nanobodies that effectively neutralize SARS-CoV-2
Custódio TF, Das H, Sheward DJ, ..., Hällberg BM, Löw C
Nat Commun 11 (1) - [2020-11-04; online 2020-11-04]
Category: Biochemistry Category: Other Category: Proteins Funder: H2020 Funder: KAW/SciLifeLab National COVID program Funder: VR Research Area: Host cell systems biology and targets Type: Journal article
PubMed DOI Crossref
Expansion of SARS-CoV-2-Specific Antibody-Secreting Cells and Generation of Neutralizing Antibodies in Hospitalized COVID-19 Patients.
Varnaitė R, García M, Glans H, ..., Klingström J, Gredmark-Russ S
J Immunol 205 (9) 2437-2446 [2020-11-01; online 2020-09-02]
Category: Biochemistry Category: Health Category: Proteins Funder: KAW/SciLifeLab National COVID program Funder: VR Research Area: Host cell systems biology and targets Type: Journal article
PubMed DOI Crossref
Crystal Structure of Non-Structural Protein 10 from Severe Acute Respiratory Syndrome Coronavirus-2.
Rogstam A, Nyblom M, Christensen S, ..., Knecht W, Kozielski F
Int J Mol Sci 21 (19) - [2020-10-06; online 2020-10-06]
Category: Proteins Type: Journal article
PubMed DOI Crossref
Robust T Cell Immunity in Convalescent Individuals with Asymptomatic or Mild COVID-19.
Sekine T, Perez-Potti A, Rivera-Ballesteros O, ..., Aleman S, Buggert M
Cell 183 (1) 158-168.e14 [2020-10-01; online 2020-08-14]
Category: Genomics & transcriptomics Category: Other Category: Proteins Funder: KAW/SciLifeLab National COVID program Funder: VR Research Area: Data-driven research – models and AI Research Area: Host cell systems biology and targets Type: Journal article
PubMed DOI Crossref
MAIT cell activation and dynamics associated with COVID-19 disease severity.
Parrot T, Gorin J, Ponzetta A, ..., Strålin K, Sandberg JK
Sci Immunol 5 (51) - [2020-09-28; online 2020-09-30]
Category: Genomics & transcriptomics Category: Health Category: Proteins Funder: KAW/SciLifeLab National COVID program Funder: VR Research Area: Data-driven research – models and AI Research Area: Host cell systems biology and targets Type: Journal article
PubMed DOI Crossref
Mitigation of the replication of SARS-CoV-2 by nitric oxide in vitro
Akaberi D, Krambrich J, Ling J, ..., Lennerstrand J, Lundkvist Å
Redox Biology 37 (-) 101734 [2020-09-21; online 2020-09-21]
Category: Imaging Category: Proteins Funder: KAW/SciLifeLab National COVID program Funder: VR Research Area: Drug discovery and repurposing of drugs Type: Journal article
DOI Crossref
Development, clinical translation, and utility of a COVID-19 antibody test with qualitative and quantitative readouts.
Bortz RH, Florez C, Laudermilch E, ..., Lai JR, Chandran K
mSphere 6 (2) - [2020-09-11; online 2020-09-11]
Category: Biochemistry Category: Health Category: Proteins Category: Serology Type: Journal article
PubMed DOI Crossref
Natural killer cell immunotypes related to COVID-19 disease severity.
Maucourant C, Filipovic I, Ponzetta A, ..., Björkström NK, Karolinska COVID-19 Study Group
Sci Immunol 5 (50) - [2020-08-21; online 2020-08-23]
Category: Biochemistry Category: Genomics & transcriptomics Category: Health Category: Imaging Category: Other Category: Proteins Funder: KAW/SciLifeLab National COVID program Funder: VR Funder: VR: Special COVID-19 funding Research Area: Data-driven research – models and AI Research Area: Diagnostics for virus Research Area: Host cell systems biology and targets Type: Journal article
PubMed DOI Crossref
On the interactions of the receptor-binding domain of SARS-CoV-1 and SARS-CoV-2 spike proteins with monoclonal antibodies and the receptor ACE2.
Corrêa Giron C, Laaksonen A, Barroso da Silva FL
Virus Res 285 (-) 198021 [2020-08-00; online 2020-05-15]
Category: Biochemistry Category: Proteins Type: Journal article
PubMed DOI Crossref
Ultra-High-Throughput Clinical Proteomics Reveals Classifiers of COVID-19 Infection.
Messner CB, Demichev V, Wendisch D, ..., Sander LE, Ralser M
Cell Syst 11 (1) 11-24.e4 [2020-07-22; online 2020-06-02]
Category: Other Category: Proteins Category: Serology Type: Journal article
PubMed DOI Crossref
The protein expression profile of ACE2 in human tissues.
Hikmet F, Méar L, Edvinsson Å, ..., Uhlén M, Lindskog C
Mol Syst Biol 16 (7) e9610 [2020-07-00; online 2020-07-28]
Category: Biochemistry Category: Proteins Type: Journal article
SciLifeLab Data Centre
Publications 9.5.1